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  "Title": "Sparse Partial Least Squares (SPLS) Regression and\nClassification",
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      "title": "Lymphoma Gene Expression Dataset",
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      ],
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      "title": "Mice Dataset",
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      "file": "mice.RData",
      "class": [
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      "title": "Prostate Tumor Gene Expression Dataset",
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      "file": "prostate.RData",
      "class": [
        "list"
      ],
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      "table": false,
      "tojson": true
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